CDS
| Accession Number | TCMCG073C08714 |
| gbkey | CDS |
| Protein Id | XP_010532295.1 |
| Location | join(3021996..3022365,3022552..3022696,3022782..3022911,3023158..3023232,3023801..3023990,3024172..3024370,3024515..3024617,3024726..3024869,3025002..3025049,3025136..3025207,3025296..3025402,3025514..3025662,3025857..3026079,3026205..3026430,3026561..3026709,3026844..3027006,3027078..3027222,3027315..3027484,3027641..3027889) |
| Gene | LOC104808318 |
| GeneID | 104808318 |
| Organism | Tarenaya hassleriana |
Protein
| Length | 1018aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA268022 |
| db_source | XM_010533993.1 |
| Definition | PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Tarenaya hassleriana] |
EGGNOG-MAPPER Annotation
| COG_category | H |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGAATGGAATCTGTGTGAGAGAGATCAATTCGGGAATTCCTACTACGAAATCGAAACGATGAGCGGTTCCCGGCCTGATATCACTCTTCCCGACAAGGCAGAGGCCTTGTTAGGGCAAATCTACTTCAAACACAAGCTTCCTCCGATCAATCCGGACACGAGGCTGAGGCTCTCGTCGATTCCTGAGGAATTAGCTCTTGAGACACTCAGGAAAGTGTATAATTCTAAGGTCAAGTATACCCTCGATGGGTACATCAATTTTCTGCTTTCCAATTCCACCGGCTTCGGATCGCCGCTGCCGAGCCCCGGCGGTTCTCCGGCGAAGACTCCGAACTCATCCGGCAAAATTGGTTGCAGGGCTTTTCAAGCAGAAATAGCACATGATTCTGAAACCCGGCATCTGAAGAACTCGAGGAGAGAAGATGATGGAGCGTCTCTGTTCAGTTCCCAGCAGTTGGCTTTGGGTGAACTCGAATTTAAGAAGGCCTTTCTCATGCTGAACTATATTGCAGATAAACGTCTGGAGGAGGTTATAACTGCTGATGAAATCAGGAGGATGAAGGACTTGCCAATGGTTGAATATGAGTCAGGAATTTGGAACCGGTTGGGCCTACATTTCTGTCGCAGAGAGGACCGTAGAATGTTGCTTGAATGGGATTGTGGGAAGCCTCACTACTATCAGTGCTATGTTGCTTCAGATGGTACTTGTAGATTCAAGGGTCCTTTTCTAGAGAACACTACAACACACTTGCACAAGGTTTTGGGTGATGAGAATGTTCTAATGGTGAAATTTGAGGACGTTGCATGCCGGAGAGATTTGCCGATAAACAGTAGTGACTCTTATTCTACATACAAACACATTGCGACCAATGGAATAATGATCGGTTTACGCCGCTATCAATTTTTTGTGTTTAAAGATGGGGGCAAAGAAGAGAAGAAGAAAGATCCGTCTACAAAGGGAGTTAAATGTTATTTTGTATGCACAGATTCTAGAGCATTTAATGACCGGGGAAAAGATTATAATTTTTCCAGGAAATCAGTCCATGAGGTTCGAATGCATTTTATGCATGTGCATAATTTGCAAACGTTAGCCAACTATATGGCAAGGTTTTCTTTAATTCTGTCAAAGACAAAGAAGCTTGAAGTTGACCTGACTGACATTAACTTCGACAGAATTGATGACATAAACTGCCATGTATTTCTATATACCGATCAAGATGGTAATGTTGTTTTTGATAAGAATGGGAAACCTTTTATACATTCAGATGGAACTGGCTACATCTCTGAAGACCTTGCTCGGAAATGTCCTATGAACATATATAAAGGGCAATGTACCAGAGGCAAACATGTTCAGGGGAATGTATCAGAATTTGAAGCACAGGAAGGCTGTAGTCAAGAGCCACCTCTGCTGATTCAGTTCCGGCTGTTTTACAATGGTTGTGCTGTCAAGGGAACATTTCTGATGAACAAAAAACTTCCTCCTAGGACCATCCAGGTTCGACCTTCTATGATAAAGGTGGACACAGATCCACACCTGTCAAATTTTAGCAGCATTAACTCTCTCGAGGTAGTTAGTACAAGTAACCCACCCAAAAGAACAAAACTATCTCGAAATTTAATTGCACTTCTTAGCTATGGAGAAGTTCCAAATGACTTCTTCTTGGATATTTTGCTCAACACTTTGGAAGAGTCAAAAACCATATTCTATGATACTCGGGCAGCTCTTAAAGTTGCCTTAAACTATGCTGACATGGATGATTACAATGCTGTGGATATGATCACGGCTGGTATTCCCCTTGAAGAACCATTCTTGAAGCATCACCTTTCTATACTATTAAAGACAGAGAGGAAAGATCTCAAAGCTGGAAAGCTTCCTGTCGCTGAATCTTACTATCTGATGGGAACGGTTGATCCCACTGGAATGTTGGAGAAAGATGAAGTCTGTGTCATCCTTGAGACTGGTCAAATTTCGGGAGATGTGTTAGTTTACAGGAATCCTGGGTTGCATTTCGGAGACATACACATTCTGAAGGCCACATATGTAAAGTCCTTGGAAGACTTTGTCGGAAATTCTAAGTACGGTGTATTTTTCCCTCAGAAAGGTCCAAGATCTTTGGGGGATGAGATTGCAGGCGGTGATTTCGATGGTGATATGTATTTCGTATCCAGAAATCCTGAGTTGCTCAAATATTTCAAGGCAAGCAAACCATGGGTGAGTTTGTCTTCAACAAGTAAAAGCATTTCTGGTAGAAGGCCAAGTGACCTTTCCTCACAAGAGTTGGAAGATGAGCTCTTTAATATGTTCTTGGCGACTAGGTTTCGCTCCTTCAATGTCATAGGGATGGCTGCAGATAGCTGGCTTGCGATCATGGATCGCTTGCTCATTCTAGGAGATGACAGAGCTGGTGAAAAAGTCGAAATGAAGAAAACAATGCATCAGTTGATCGATATATACTACGATGCTCTAGATGCACCTAAAAAGGGGGCTAAGGTTGATCTCCCAAATGAATTGAGGGCCGATATGTTTCCCCATTACATGGAGCGTGACCCAGAGAAATCTTTCAGATCCACCTCTGTTCTTGGATTAATCTATGACTTTGTTAAATCTCACAAGACGGAGGAAATCTCGCCATCTGAAATCAAGAAACTCCCATGTTTTGAAGCAGAACAGGTGCCTGAGTCTCTCACGGAGAGATTGAAAAATTGGTATGAGAACTACAGAGCTGAGATGAGCCGGGCCTTGGATTTGAAAATCGCGAGTGACAGGAATGGAGCAGCCGATGAAATTATCAGGAGATACAAACAGGAGTTCTATGGTTCGGCTGGGTTTGAAGACTGGGAGAAACATCGCGAAGAACTCTACCCGCGTGCTATTGCGATCTACAATTTGGTTTATGACCACGCCATCAGAACACAAAGGGTGGCAAATTGTGGGTTCGCTTGGAAAGTTGCAGGTCCGGTACTGTCTCGGTTTTACTCCGAAAGAACTCCCGGAAAGACTGTTTTGTGTTCAGTCGCAGTCCTAAGAGATATATTGGGTAATAGACGGATTTGA |
| Protein: MEWNLCERDQFGNSYYEIETMSGSRPDITLPDKAEALLGQIYFKHKLPPINPDTRLRLSSIPEELALETLRKVYNSKVKYTLDGYINFLLSNSTGFGSPLPSPGGSPAKTPNSSGKIGCRAFQAEIAHDSETRHLKNSRREDDGASLFSSQQLALGELEFKKAFLMLNYIADKRLEEVITADEIRRMKDLPMVEYESGIWNRLGLHFCRREDRRMLLEWDCGKPHYYQCYVASDGTCRFKGPFLENTTTHLHKVLGDENVLMVKFEDVACRRDLPINSSDSYSTYKHIATNGIMIGLRRYQFFVFKDGGKEEKKKDPSTKGVKCYFVCTDSRAFNDRGKDYNFSRKSVHEVRMHFMHVHNLQTLANYMARFSLILSKTKKLEVDLTDINFDRIDDINCHVFLYTDQDGNVVFDKNGKPFIHSDGTGYISEDLARKCPMNIYKGQCTRGKHVQGNVSEFEAQEGCSQEPPLLIQFRLFYNGCAVKGTFLMNKKLPPRTIQVRPSMIKVDTDPHLSNFSSINSLEVVSTSNPPKRTKLSRNLIALLSYGEVPNDFFLDILLNTLEESKTIFYDTRAALKVALNYADMDDYNAVDMITAGIPLEEPFLKHHLSILLKTERKDLKAGKLPVAESYYLMGTVDPTGMLEKDEVCVILETGQISGDVLVYRNPGLHFGDIHILKATYVKSLEDFVGNSKYGVFFPQKGPRSLGDEIAGGDFDGDMYFVSRNPELLKYFKASKPWVSLSSTSKSISGRRPSDLSSQELEDELFNMFLATRFRSFNVIGMAADSWLAIMDRLLILGDDRAGEKVEMKKTMHQLIDIYYDALDAPKKGAKVDLPNELRADMFPHYMERDPEKSFRSTSVLGLIYDFVKSHKTEEISPSEIKKLPCFEAEQVPESLTERLKNWYENYRAEMSRALDLKIASDRNGAADEIIRRYKQEFYGSAGFEDWEKHREELYPRAIAIYNLVYDHAIRTQRVANCGFAWKVAGPVLSRFYSERTPGKTVLCSVAVLRDILGNRRI |